avogadro/qtplugins/insertfragment enables entire fragments to be added
when building a molecule.

Data for the fragments is maintained in 
  https://github.com/openchemistry/molecules
  https://github.com/openchemistry/crystals
  https://github.com/openchemistry/fragments

These data sets are made accessible for the debian build as git
subtrees in the debian folder.

(A git subtree is simpler to manage than a git submodule for simple
copies that not expected to be pushed back upstream)

The molecules and crystals data sets can be updated with

  git subtree pull --prefix debian/data/molecules https://github.com/openchemistry/molecules master --squash
  git subtree pull --prefix debian/data/crystals https://github.com/openchemistry/crystals master --squash
  git subtree pull --prefix debian/data/fragments https://github.com/openchemistry/fragments main --squash

master or main may be replaced by a tag id to update to a specific version.
